LOC479890 | GeneID:479890 | Canis lupus familiaris
Gene Summary
[ 
] NCBI Entrez Gene
| Gene ID | 479890 | Official Symbol | LOC479890 |
|---|---|---|---|
| Locus | N/A | Gene Type | protein-coding |
| Synonyms | |||
| Full Name | N/A | ||
| Description | similar to CG4338-PA | ||
| Chromosome | N/A | ||
| Also Known As | |||
| Summary | N/A | ||
Orthologs and Paralogs
[ ] Homologs - NCBI's HomoloGene Group: 6922
| ID | Symbol | Protein | Species |
|---|---|---|---|
| GeneID:41849 | CG4338 | NP_650441.1 | Drosophila melanogaster |
| GeneID:68327 | 0610007P22Rik | NP_080952.1 | Mus musculus |
| GeneID:115939 | C16orf42 | NP_001001410.1 | Homo sapiens |
| GeneID:176995 | F52C12.2 | NP_741332.1 | Caenorhabditis elegans |
| GeneID:360494 | RGD1565744 | XP_340769.3 | Rattus norvegicus |
| GeneID:416590 | C16orf42 | XP_414890.1 | Gallus gallus |
| GeneID:436643 | zgc:92086 | NP_001002370.1 | Danio rerio |
| GeneID:479890 | LOC479890 | XP_537015.1 | Canis lupus familiaris |
| GeneID:508714 | C25H16ORF42 | XP_585533.1 | Bos taurus |
| GeneID:830871 | AT5G10070 | NP_974761.1 | Arabidopsis thaliana |
| GeneID:854167 | TSR3 | NP_014648.1 | Saccharomyces cerevisiae |
| GeneID:1277553 | AgaP_AGAP008424 | XP_317021.2 | Anopheles gambiae |
| GeneID:2542142 | SPAC1F3.04c | NP_593007.1 | Schizosaccharomyces pombe |
| GeneID:2674813 | MGG_00851 | XP_368393.1 | Magnaporthe grisea |
| GeneID:2707891 | NCU06104.1 | XP_325959.1 | Neurospora crassa |
| GeneID:2892859 | KLLA0D01111g | XP_453120.1 | Kluyveromyces lactis |
| GeneID:4331931 | Os03g0195200 | NP_001049256.1 | Oryza sativa |
| GeneID:4619535 | AGOS_ACR007W | NP_983410.1 | Eremothecium gossypii |
MicroRNA and Targets
[ ] MicroRNA Sequences and Transcript Targets from miRBase at Sanger
| RNA Target | miRNA # | mat miRNA | Mature miRNA Sequence |
|---|---|---|---|
| ENSCAFT00000031131 | MI0005009 | bta-miR-139 | UCUACAGUGCACGUGUCUCCAGU |
| ENSCAFT00000031131 | MI0005058 | bta-miR-150 | UCUCCCAACCCUUGUACCAGUGU |
| ENSCAFT00000031131 | MI0004997 | gga-miR-456 | CAGGCUGGUUAGAUGGUUGUCA |
| ENSCAFT00000031131 | MI0000448 | hsa-miR-130a | CAGUGCAAUGUUAAAAGGGCAU |
| ENSCAFT00000031131 | MI0000748 | hsa-miR-130b | CAGUGCAAUGAUGAAAGGGCAU |
| ENSCAFT00000031131 | MI0000454 | hsa-miR-137 | UUAUUGCUUAAGAAUACGCGUAG |
| ENSCAFT00000031131 | MI0000484 | hsa-miR-188-3p | CUCCCACAUGCAGGGUUUGCA |
| ENSCAFT00000031131 | MI0000814 | hsa-miR-338-3p | UCCAGCAUCAGUGAUUUUGUUG |
| ENSCAFT00000031131 | MI0002469 | hsa-miR-485-5p | AGAGGCUGGCCGUGAUGAAUUC |
| ENSCAFT00000031131 | MI0003127 | hsa-miR-511 | GUGUCUUUUGCUCUGCAGUCA |
| ENSCAFT00000031131 | MI0003128 | hsa-miR-511 | GUGUCUUUUGCUCUGCAGUCA |
| ENSCAFT00000031131 | MI0003140 | hsa-miR-512-3p | AAGUGCUGUCAUAGCUGAGGUC |
| ENSCAFT00000031131 | MI0003141 | hsa-miR-512-3p | AAGUGCUGUCAUAGCUGAGGUC |
| ENSCAFT00000031131 | MI0003170 | hsa-miR-518a-5p | CUGCAAAGGGAAGCCCUUUC |
| ENSCAFT00000031131 | MI0003173 | hsa-miR-518a-5p | CUGCAAAGGGAAGCCCUUUC |
| ENSCAFT00000031131 | MI0005527 | hsa-miR-886-5p | CGGGUCGGAGUUAGCUCAAGCGG |
| ENSCAFT00000031131 | MI0005716 | hsa-miR-924 | AGAGUCUUGUGAUGUCUUGC |
| ENSCAFT00000031131 | MI0005759 | hsa-miR-937 | AUCCGCGCUCUGACUCUCUGCC |
| ENSCAFT00000031131 | MI0005762 | hsa-miR-940 | AAGGCAGGGCCCCCGCUCCCC |
| ENSCAFT00000031131 | MI0000390 | mmu-miR-292-5p | ACUCAAACUGGGGGCUCUUUUG |
| ENSCAFT00000031131 | MI0002401 | mmu-miR-466a-3p | UAUACAUACACGCACACAUAAGA |
| ENSCAFT00000031131 | MI0005504 | mmu-miR-466b-3-3p | AAUACAUACACGCACACAUAAGA |
| ENSCAFT00000031131 | MI0005546 | mmu-miR-466d-3p | UAUACAUACACGCACACAUAG |
| ENSCAFT00000031131 | MI0005507 | mmu-miR-466f-3p | CAUACACACACACAUACACAC |
| ENSCAFT00000031131 | MI0005508 | mmu-miR-466f-3p | CAUACACACACACAUACACAC |
| ENSCAFT00000031131 | MI0005509 | mmu-miR-466f-3p | CAUACACACACACAUACACAC |
| ENSCAFT00000031131 | MI0005507 | mmu-miR-466f-5p | UACGUGUGUGUGCAUGUGCAUG |
| ENSCAFT00000031131 | MI0005508 | mmu-miR-466f-5p | UACGUGUGUGUGCAUGUGCAUG |
| ENSCAFT00000031131 | MI0005509 | mmu-miR-466f-5p | UACGUGUGUGUGCAUGUGCAUG |
| ENSCAFT00000031131 | MI0003518 | mmu-miR-540-5p | CAAGGGUCACCCUCUGACUCUGU |
| ENSCAFT00000031131 | MI0004646 | mmu-miR-683 | CCUGCUGUAAGCUGUGUCCUC |
| ENSCAFT00000031131 | MI0004708 | mmu-miR-721 | CAGUGCAAUUAAAAGGGGGAA |
| ENSCAFT00000031131 | MI0004310 | mmu-miR-764-3p | AGGAGGCCAUAGUGGCAACUGU |
| ENSCAFT00000031131 | MI0005476 | mmu-miR-883a-3p | UAACUGCAACAGCUCUCAGUAU |
| ENSCAFT00000031131 | MI0005477 | mmu-miR-883b-3p | UAACUGCAACAUCUCUCAGUAU |
| ENSCAFT00000031131 | MI0005477 | mmu-miR-883b-5p | UACUGAGAAUGGGUAGCAGUCA |