140up | GeneID:41720 | Drosophila melanogaster

Gene Summary

[ - ] NCBI Entrez Gene

Gene ID 41720 Official Symbol 140up
Locus Dmel_CG9852 Gene Type protein-coding
Synonyms CG9852; DmRP140-upstream; DmRP140up; DmelCG9852; l(3)88Ba; l(3)Z6
Full Name N/A
Description upstream of RpII140
Chromosome 88A9-88A9
Also Known As 140up-PA; CG9852-PA
Summary N/A

Orthologs and Paralogs

[ - ] Homologs - NCBI's HomoloGene Group: 9578

ID Symbol Protein Species
GeneID:41720 140up NP_476951.1 Drosophila melanogaster
GeneID:51300 C3orf1 NP_057673.2 Homo sapiens
GeneID:76916 4930455C21Rik NP_077235.1 Mus musculus
GeneID:303922 RGD1359380 NP_001007677.1 Rattus norvegicus
GeneID:460606 LOC460606 XP_516667.1 Pan troglodytes
GeneID:487994 LOC487994 XP_545116.2 Canis lupus familiaris
GeneID:507206 MGC152111 XP_583776.3 Bos taurus
GeneID:550526 zgc:110196 NP_001017828.1 Danio rerio
GeneID:777069 LOC777069 XP_001236548.1 Gallus gallus
GeneID:1281750 AgaP_AGAP001426 XP_321704.2 Anopheles gambiae

Gene Classification

[ - ] Gene Ontology

IDCategoryGO Term
GO:0005743 Component mitochondrial inner membrane
GO:0008565 Function protein transporter activity
GO:0007275 Process multicellular organismal development
GO:0015031 Process protein transport

RefSeq Isoforms

[ - ] RefSeq Annotation and UniProt Database

No. RefSeq RNA RefSeq Protein UniProt Equivalent
1 NM_057603 NP_476951

Transcript Sequences

[ - ] Transcript Accession Number Cloud [ GenBank ]

NM_057603  

Protein Sequences

[ - ] Protein Accession Number Cloud [ GenPept ]

Transcript Cluster

[ - ] NCBI's UniGene

Selected Publications

[ - ] Gene-related publications indexed at PubMed

  1. [ + ] Hoskins RA, et al. (2007) "Sequence finishing and mapping of Drosophila melanogaster heterochromatin." Science. 316(5831):1625-1628. PMID:17569867
  2. [ + ] Smith CD, et al. (2007) "The Release 5.1 annotation of Drosophila melanogaster heterochromatin." Science. 316(5831):1586-1591. PMID:17569856
  3. [ + ] Quesneville H, et al. (2005) "Combined evidence annotation of transposable elements in genome sequences." PLoS Comput Biol. 1(2):166-175. PMID:16110336
  4. [ + ] Ceriani MF, et al. (2002) "Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior." J Neurosci. 22(21):9305-9319. PMID:12417656
  5. [ + ] Celniker SE, et al. (2002) "Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence." Genome Biol. 3(12):RESEARCH0079. PMID:12537568
  6. [ + ] Misra S, et al. (2002) "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Genome Biol. 3(12):RESEARCH0083. PMID:12537572
  7. [ + ] Kaminker JS, et al. (2002) "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective." Genome Biol. 3(12):RESEARCH0084. PMID:12537573
  8. [ + ] Hoskins RA, et al. (2002) "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly." Genome Biol. 3(12):RESEARCH0085. PMID:12537574
  9. [ + ] Wahlstrom G, et al. (2001) "Twinfilin is required for actin-dependent developmental processes in Drosophila." J Cell Biol. 155(5):787-796. PMID:11724820
  10. [ + ] Adams MD, et al. (2000) "The genome sequence of Drosophila melanogaster." Science. 287(5461):2185-2195. PMID:10731132
  11. [ + ] Wiedemann M, et al. (1997) "Transcription of DmRP140, the gene coding for the second-largest subunit of RNA polymerase II." Biochim Biophys Acta. 1350(3):282-286. PMID:9061024
  12. [ + ] Hamilton BJ, et al. (1993) "Reverse genetics of Drosophila RNA polymerase II: identification and characterization of RpII140, the genomic locus for the second-largest subunit." Genetics. 134(2):517-529. PMID:8325487
  13. [ + ] Mortin MA, et al. (1992) "Mutations in the second-largest subunit of Drosophila RNA polymerase II interact with Ubx." Genetics. 131(4):895-903. PMID:1516820
  14. [ + ] Breen TR, et al. (1991) "Molecular characterization of the trithorax gene, a positive regulator of homeotic gene expression in Drosophila." Mech Dev. 35(2):113-127. PMID:1684714
  15. [ + ] Sitzler S, et al. (1991) "Analysis of the promoter region of the housekeeping gene DmRP140 by sequence comparison of Drosophila melanogaster and Drosophila virilis." Gene. 100():155-162. PMID:1905256